Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.93□□□□□ -0.34
Cpne8Q9DC53 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne8Q9DC53 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Gm12314-201ENSMUST00000118104 538 ntBASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Gm13342-201ENSMUST00000121055 207 ntBASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Gm8227-201ENSMUST00000223306 571 ntBASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cpne8Q9DC53 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Gm13829-201ENSMUST00000119600 138 ntBASIC12.91□□□□□ -0.34
Cpne8Q9DC53 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Gm27514-201ENSMUST00000183692 110 ntBASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpne8Q9DC53 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms