Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdc40Q9DC48 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Snord83b-201ENSMUST00000104546 94 ntBASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdc40Q9DC48 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Gm15236-201ENSMUST00000117309 379 ntBASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Gm24548-201ENSMUST00000158650 108 ntBASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Gm26956-201ENSMUST00000182176 986 ntBASIC11.55□□□□□ -0.56
Cdc40Q9DC48 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Gm37259-201ENSMUST00000193903 849 ntBASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Gm32025-201ENSMUST00000217960 307 ntBASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdc40Q9DC48 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms