Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.54□□□□□ -0.08
Rufy3Q9D394 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Gm13316-201ENSMUST00000140537 691 ntBASIC14.54□□□□□ -0.08
Rufy3Q9D394 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.54□□□□□ -0.08
Rufy3Q9D394 Gm6007-201ENSMUST00000208170 823 ntBASIC14.54□□□□□ -0.08
Rufy3Q9D394 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.54□□□□□ -0.08
Rufy3Q9D394 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.54□□□□□ -0.08
Rufy3Q9D394 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Rufy3Q9D394 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.53□□□□□ -0.08
Rufy3Q9D394 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Gm22018-201ENSMUST00000104357 131 ntBASIC14.53□□□□□ -0.08
Rufy3Q9D394 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.53□□□□□ -0.08
Rufy3Q9D394 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy3Q9D394 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy3Q9D394 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.52□□□□□ -0.08
Rufy3Q9D394 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy3Q9D394 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy3Q9D394 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy3Q9D394 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy3Q9D394 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy3Q9D394 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy3Q9D394 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy3Q9D394 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy3Q9D394 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Rufy3Q9D394 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy3Q9D394 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy3Q9D394 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.52□□□□□ -0.09
Rufy3Q9D394 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.52□□□□□ -0.09
Rufy3Q9D394 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.52□□□□□ -0.09
Rufy3Q9D394 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.52□□□□□ -0.09
Rufy3Q9D394 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy3Q9D394 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy3Q9D394 Gm42937-201ENSMUST00000197360 752 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms