Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Gm21854-201ENSMUST00000179901 471 ntBASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Gm44872-201ENSMUST00000207864 420 ntBASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Mir6956-201ENSMUST00000183598 62 ntBASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Gm42599-201ENSMUST00000201308 469 ntBASIC12.47□□□□□ -0.41
Trim42Q9D2H5 CT009764.1-201ENSMUST00000222260 483 ntBASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim42Q9D2H5 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Gm14921-201ENSMUST00000118643 908 ntBASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms