Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.74□□□□□ -0.53
Upk1aQ9D132 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.74□□□□□ -0.53
Upk1aQ9D132 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Gm11637-201ENSMUST00000120601 592 ntBASIC11.73□□□□□ -0.53
Upk1aQ9D132 Gm12091-201ENSMUST00000146791 830 ntBASIC11.73□□□□□ -0.53
Upk1aQ9D132 Rmrp-201ENSMUST00000157463 271 ntBASIC11.73□□□□□ -0.53
Upk1aQ9D132 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Gm27243-201ENSMUST00000183964 521 ntBASIC11.73□□□□□ -0.53
Upk1aQ9D132 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.73□□□□□ -0.53
Upk1aQ9D132 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.73□□□□□ -0.53
Upk1aQ9D132 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Upk1aQ9D132 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Upk1aQ9D132 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.73□□□□□ -0.53
Upk1aQ9D132 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.73□□□□□ -0.53
Upk1aQ9D132 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.73□□□□□ -0.53
Upk1aQ9D132 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Gm6180-201ENSMUST00000065243 498 ntBASIC11.73□□□□□ -0.53
Upk1aQ9D132 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk1aQ9D132 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.72□□□□□ -0.53
Upk1aQ9D132 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Upk1aQ9D132 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Gm8213-201ENSMUST00000118191 441 ntBASIC11.72□□□□□ -0.53
Upk1aQ9D132 Gm11803-201ENSMUST00000119966 444 ntBASIC11.72□□□□□ -0.53
Upk1aQ9D132 Gm23984-201ENSMUST00000157139 203 ntBASIC11.72□□□□□ -0.53
Upk1aQ9D132 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Gm4034-201ENSMUST00000187674 480 ntBASIC11.72□□□□□ -0.53
Upk1aQ9D132 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.72□□□□□ -0.53
Upk1aQ9D132 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.72□□□□□ -0.53
Upk1aQ9D132 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.72□□□□□ -0.53
Upk1aQ9D132 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.72□□□□□ -0.53
Upk1aQ9D132 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Gm45384-201ENSMUST00000210451 277 ntBASIC11.72□□□□□ -0.53
Upk1aQ9D132 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.72□□□□□ -0.53
Upk1aQ9D132 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.72□□□□□ -0.53
Upk1aQ9D132 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.72□□□□□ -0.53
Upk1aQ9D132 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1aQ9D132 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms