Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Gm12203-201ENSMUST00000118235 598 ntBASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Gm12209-201ENSMUST00000120089 596 ntBASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Gm32025-201ENSMUST00000217960 307 ntBASIC12.78□□□□□ -0.36
Snf8Q9CZ28 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Gm24526-201ENSMUST00000082921 158 ntBASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.78□□□□□ -0.36
Snf8Q9CZ28 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
Snf8Q9CZ28 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Snf8Q9CZ28 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Snf8Q9CZ28 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Snf8Q9CZ28 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Snf8Q9CZ28 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Snf8Q9CZ28 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Snf8Q9CZ28 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Snf8Q9CZ28 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Snf8Q9CZ28 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Snf8Q9CZ28 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Snf8Q9CZ28 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Gm11918-201ENSMUST00000121660 179 ntBASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Gm44882-201ENSMUST00000205702 802 ntBASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Gm45384-201ENSMUST00000210451 277 ntBASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Gm10146-201ENSMUST00000072739 309 ntBASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Gm24136-201ENSMUST00000083374 165 ntBASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snf8Q9CZ28 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms