Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Gm14660-201ENSMUST00000119809 575 ntBASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Gm11637-201ENSMUST00000120601 592 ntBASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Gm2231-201ENSMUST00000125661 612 ntBASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Gm26927-201ENSMUST00000182385 965 ntBASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpusd4Q9CWX4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Gm11425-201ENSMUST00000119608 498 ntBASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Gm13123-201ENSMUST00000122173 492 ntBASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Snora78-201ENSMUST00000158630 128 ntBASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Mir7085-201ENSMUST00000184353 66 ntBASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Gm27731-201ENSMUST00000185192 107 ntBASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 AY702102-202ENSMUST00000194651 1173 ntBASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Gm9396-201ENSMUST00000076703 567 ntBASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rpusd4Q9CWX4 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms