Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg3Q9CQV4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retreg3Q9CQV4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retreg3Q9CQV4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retreg3Q9CQV4 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retreg3Q9CQV4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.83□□□□□ -0.35
Retreg3Q9CQV4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm22018-201ENSMUST00000104357 131 ntBASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm16296-201ENSMUST00000159905 325 ntBASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm44364-201ENSMUST00000198368 141 ntBASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm34165-201ENSMUST00000222012 1174 ntBASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 AC134254.4-201ENSMUST00000223086 370 ntBASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg3Q9CQV4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm14417-201ENSMUST00000120036 1074 ntBASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm1848-201ENSMUST00000120711 789 ntBASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm12591-201ENSMUST00000122407 1177 ntBASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm7809-201ENSMUST00000153199 742 ntBASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm6182-201ENSMUST00000156439 1208 ntBASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 AC134860.5-201ENSMUST00000225071 1249 ntBASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 AC117949.2-201ENSMUST00000225900 584 ntBASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms