Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Gm13332-201ENSMUST00000120451 1398 ntBASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Gm36987-201ENSMUST00000194704 2979 ntBASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Gm43172-201ENSMUST00000202139 2137 ntBASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39lQ9CQD0 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Gm17230-201ENSMUST00000171194 3942 ntBASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Gm45776-201ENSMUST00000212366 1522 ntBASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Gm6458-201ENSMUST00000211573 635 ntBASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 AC164629.2-201ENSMUST00000217916 270 ntBASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 AC159114.1-201ENSMUST00000220349 266 ntBASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39lQ9CQD0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm45496-201ENSMUST00000209918 2917 ntBASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms