Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Krt88Q9CPR6 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Gm12384-201ENSMUST00000119228 919 ntBASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Gm14704-201ENSMUST00000120300 874 ntBASIC11.19□□□□□ -0.62
Krt88Q9CPR6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Gm27437-201ENSMUST00000183429 107 ntBASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Gm8099-201ENSMUST00000200510 742 ntBASIC11.19□□□□□ -0.62
Krt88Q9CPR6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Krt88Q9CPR6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Gm22189-201ENSMUST00000103822 86 ntBASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Gm14719-201ENSMUST00000121891 340 ntBASIC11.18□□□□□ -0.62
Krt88Q9CPR6 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Gm5866-201ENSMUST00000177881 973 ntBASIC11.18□□□□□ -0.62
Krt88Q9CPR6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Krt88Q9CPR6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms