Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh15Q99PJ1 Gm4978-201ENSMUST00000071565 801 ntBASIC13.7□□□□□ -0.22
Pcdh15Q99PJ1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pcdh15Q99PJ1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh15Q99PJ1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh15Q99PJ1 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh15Q99PJ1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh15Q99PJ1 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.7□□□□□ -0.22
Pcdh15Q99PJ1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Gm11560-201ENSMUST00000117567 948 ntBASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Gm12712-201ENSMUST00000120676 801 ntBASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh15Q99PJ1 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Gm17214-201ENSMUST00000164501 541 ntBASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Gm11500-201ENSMUST00000118237 601 ntBASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Gm15374-201ENSMUST00000119313 844 ntBASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Gm15620-201ENSMUST00000122949 270 ntBASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Gm26976-201ENSMUST00000182929 908 ntBASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh15Q99PJ1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Gm22846-201ENSMUST00000157706 270 ntBASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Gm43671-201ENSMUST00000200422 433 ntBASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Gm45085-201ENSMUST00000209100 441 ntBASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Arhgef33-210ENSMUST00000225548 456 ntBASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.67□□□□□ -0.22
Pcdh15Q99PJ1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms