Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Gm24943-201ENSMUST00000158329 433 ntBASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Gm45085-201ENSMUST00000209100 441 ntBASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.29□□□□□ -0.44
Cdh23Q99PF4 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh23Q99PF4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Gm13700-201ENSMUST00000118624 1128 ntBASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Gm29808-201ENSMUST00000194419 468 ntBASIC12.28□□□□□ -0.44
Cdh23Q99PF4 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Gm14942-201ENSMUST00000119642 336 ntBASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh23Q99PF4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Gm44506-201ENSMUST00000206278 965 ntBASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.27□□□□□ -0.44
Cdh23Q99PF4 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh23Q99PF4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Defa-ps17-201ENSMUST00000121849 171 ntBASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Gm15620-201ENSMUST00000122949 270 ntBASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 AC159810.1-201ENSMUST00000214838 1480 ntBASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cdh23Q99PF4 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms