Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Matn2-203ENSMUST00000226766 3252 ntBASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Gm3096-201ENSMUST00000185770 364 ntBASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Gm39404-201ENSMUST00000216350 313 ntBASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gtf2ird2Q99NI3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Gm24231-201ENSMUST00000104315 133 ntBASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Gm13097-201ENSMUST00000210722 397 ntBASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gtf2ird2Q99NI3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Gtf2ird2Q99NI3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Gtf2ird2Q99NI3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Gtf2ird2Q99NI3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Gtf2ird2Q99NI3 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.77□□□□□ -0.36
Gtf2ird2Q99NI3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Gtf2ird2Q99NI3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gtf2ird2Q99NI3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gtf2ird2Q99NI3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gtf2ird2Q99NI3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms