Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Gm12058-201ENSMUST00000118614 437 ntBASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Gm4986-201ENSMUST00000119731 549 ntBASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Gm10076-201ENSMUST00000073238 384 ntBASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tlr3Q99MB1 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tlr3Q99MB1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.33□□□□□ -0.27
Tlr3Q99MB1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Tlr3Q99MB1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.33□□□□□ -0.27
Tlr3Q99MB1 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tlr3Q99MB1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tlr3Q99MB1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Gm13297-201ENSMUST00000120205 934 ntBASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Gm20482-202ENSMUST00000174729 825 ntBASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Mospd4-201ENSMUST00000180618 576 ntBASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Gm6621-201ENSMUST00000193251 772 ntBASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.33□□□□□ -0.28
Tlr3Q99MB1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Gm8227-201ENSMUST00000223306 571 ntBASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 346.5 ms