Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Gm24749-201ENSMUST00000157838 343 ntBASIC10.93□□□□□ -0.66
Scrt1Q99M85 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.93□□□□□ -0.66
Scrt1Q99M85 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.93□□□□□ -0.66
Scrt1Q99M85 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.93□□□□□ -0.66
Scrt1Q99M85 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.93□□□□□ -0.66
Scrt1Q99M85 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.93□□□□□ -0.66
Scrt1Q99M85 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Gzmn-202ENSMUST00000225535 989 ntBASIC10.93□□□□□ -0.66
Scrt1Q99M85 AC140293.1-201ENSMUST00000225626 1247 ntBASIC10.93□□□□□ -0.66
Scrt1Q99M85 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.93□□□□□ -0.66
Scrt1Q99M85 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Matn2-203ENSMUST00000226766 3252 ntBASIC10.92□□□□□ -0.66
Scrt1Q99M85 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Scrt1Q99M85 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.92□□□□□ -0.66
Scrt1Q99M85 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Gm13813-201ENSMUST00000120998 787 ntBASIC10.92□□□□□ -0.66
Scrt1Q99M85 Gm14665-201ENSMUST00000122294 557 ntBASIC10.92□□□□□ -0.66
Scrt1Q99M85 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC10.92□□□□□ -0.66
Scrt1Q99M85 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Gm45433-201ENSMUST00000209386 247 ntBASIC10.92□□□□□ -0.66
Scrt1Q99M85 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.92□□□□□ -0.66
Scrt1Q99M85 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.92□□□□□ -0.66
Scrt1Q99M85 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.92□□□□□ -0.66
Scrt1Q99M85 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scrt1Q99M85 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms