Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Chmp1b1Q99LU0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp1b1Q99LU0 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.77□□□□□ -0.52
Chmp1b1Q99LU0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp1b1Q99LU0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp1b1Q99LU0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp1b1Q99LU0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Gm16177-201ENSMUST00000120728 718 ntBASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp1b1Q99LU0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Snora78-201ENSMUST00000158630 128 ntBASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Gm7029-201ENSMUST00000173226 450 ntBASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Gm22121-201ENSMUST00000175148 54 ntBASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.76□□□□□ -0.53
Chmp1b1Q99LU0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Gm14921-201ENSMUST00000118643 908 ntBASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Gm27682-201ENSMUST00000183930 110 ntBASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Mir7085-201ENSMUST00000184353 66 ntBASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms