Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clip1Q922J3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip1Q922J3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Clip1Q922J3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip1Q922J3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip1Q922J3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip1Q922J3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Clip1Q922J3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip1Q922J3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip1Q922J3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip1Q922J3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip1Q922J3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip1Q922J3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Clip1Q922J3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC19.32■□□□□ 0.68
Clip1Q922J3 Gm44711-201ENSMUST00000205414 1264 ntBASIC19.32■□□□□ 0.68
Clip1Q922J3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC19.32■□□□□ 0.68
Clip1Q922J3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Clip1Q922J3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC19.32■□□□□ 0.68
Clip1Q922J3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC19.32■□□□□ 0.68
Clip1Q922J3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC19.32■□□□□ 0.68
Clip1Q922J3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC19.32■□□□□ 0.68
Clip1Q922J3 Gm4797-201ENSMUST00000219075 1283 ntBASIC19.32■□□□□ 0.68
Clip1Q922J3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip1Q922J3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip1Q922J3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip1Q922J3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip1Q922J3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clip1Q922J3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Clip1Q922J3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip1Q922J3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clip1Q922J3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Clip1Q922J3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC19.31■□□□□ 0.68
Clip1Q922J3 Gm15595-201ENSMUST00000120840 961 ntBASIC19.31■□□□□ 0.68
Clip1Q922J3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clip1Q922J3 Gm6397-201ENSMUST00000161973 1069 ntBASIC19.31■□□□□ 0.68
Clip1Q922J3 Gm10774-201ENSMUST00000188689 204 ntBASIC19.31■□□□□ 0.68
Clip1Q922J3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC19.31■□□□□ 0.68
Clip1Q922J3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC19.31■□□□□ 0.68
Clip1Q922J3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Clip1Q922J3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip1Q922J3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip1Q922J3 Gm9785-201ENSMUST00000062642 1006 ntBASIC19.31■□□□□ 0.68
Clip1Q922J3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clip1Q922J3 Gm7551-201ENSMUST00000089593 1074 ntBASIC19.31■□□□□ 0.68
Clip1Q922J3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC19.3■□□□□ 0.68
Clip1Q922J3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clip1Q922J3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC19.3■□□□□ 0.68
Clip1Q922J3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip1Q922J3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip1Q922J3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip1Q922J3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip1Q922J3 Gm38355-201ENSMUST00000192514 1570 ntBASIC19.3■□□□□ 0.68
Clip1Q922J3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip1Q922J3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip1Q922J3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Clip1Q922J3 Gm44942-201ENSMUST00000096093 2072 ntBASIC19.3■□□□□ 0.68
Clip1Q922J3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip1Q922J3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clip1Q922J3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip1Q922J3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip1Q922J3 Gm24891-201ENSMUST00000104391 136 ntBASIC19.3■□□□□ 0.68
Clip1Q922J3 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC19.3■□□□□ 0.68
Clip1Q922J3 Gm8956-201ENSMUST00000203939 825 ntBASIC19.3■□□□□ 0.68
Clip1Q922J3 Gm45909-201ENSMUST00000212413 1031 ntBASIC19.3■□□□□ 0.68
Clip1Q922J3 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC19.3■□□□□ 0.68
Clip1Q922J3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC19.3■□□□□ 0.68
Clip1Q922J3 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip1Q922J3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip1Q922J3 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC19.29■□□□□ 0.68
Clip1Q922J3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip1Q922J3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip1Q922J3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clip1Q922J3 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clip1Q922J3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip1Q922J3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Clip1Q922J3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC19.29■□□□□ 0.68
Clip1Q922J3 Gm38094-201ENSMUST00000195864 2978 ntBASIC19.29■□□□□ 0.68
Clip1Q922J3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC19.29■□□□□ 0.68
Clip1Q922J3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip1Q922J3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip1Q922J3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Clip1Q922J3 Gm13809-201ENSMUST00000117921 597 ntBASIC19.29■□□□□ 0.68
Clip1Q922J3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC19.29■□□□□ 0.68
Clip1Q922J3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clip1Q922J3 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms