Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Gm15547-201ENSMUST00000122152 333 ntBASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Gm44364-201ENSMUST00000198368 141 ntBASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdha9Q91Y11 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gm24830-201ENSMUST00000102024 166 ntBASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gm14723-201ENSMUST00000118686 215 ntBASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gm38341-201ENSMUST00000195357 515 ntBASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gm43822-201ENSMUST00000200285 476 ntBASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gm8712-201ENSMUST00000221090 701 ntBASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gm26232-201ENSMUST00000083360 166 ntBASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha9Q91Y11 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Gm23270-201ENSMUST00000104055 131 ntBASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Gm11930-201ENSMUST00000117788 190 ntBASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Gm3096-201ENSMUST00000185770 364 ntBASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Gm43758-201ENSMUST00000199500 367 ntBASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha9Q91Y11 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms