Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdhga11Q91XY8 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga11Q91XY8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga11Q91XY8 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdhga11Q91XY8 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga11Q91XY8 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga11Q91XY8 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga11Q91XY8 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga11Q91XY8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.08□□□□□ -0.48
Pcdhga11Q91XY8 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga11Q91XY8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Snora78-201ENSMUST00000158630 128 ntBASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Gm29127-201ENSMUST00000188304 517 ntBASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Gm19184-201ENSMUST00000196798 928 ntBASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Gm24526-201ENSMUST00000082921 158 ntBASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga11Q91XY8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Gm12957-201ENSMUST00000117835 377 ntBASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Gm14660-201ENSMUST00000119809 575 ntBASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Gm16296-201ENSMUST00000159905 325 ntBASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Gm27731-201ENSMUST00000185192 107 ntBASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Gm43630-201ENSMUST00000201550 776 ntBASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga11Q91XY8 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms