Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Gm12384-201ENSMUST00000119228 919 ntBASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Gm27682-201ENSMUST00000183930 110 ntBASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Gm12363-201ENSMUST00000122250 668 ntBASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga3Q91XY5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms