Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Gm8738-201ENSMUST00000172606 329 ntBASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Gm7046-201ENSMUST00000221351 977 ntBASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Gm9823-201ENSMUST00000051212 327 ntBASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga4Q91XY4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Pcdhga4Q91XY4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga4Q91XY4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga4Q91XY4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga4Q91XY4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga4Q91XY4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga4Q91XY4 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga4Q91XY4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga4Q91XY4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga4Q91XY4 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga4Q91XY4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Snord83b-201ENSMUST00000104546 94 ntBASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Gm12502-201ENSMUST00000120197 444 ntBASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga4Q91XY4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga4Q91XY4 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga4Q91XY4 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga4Q91XY4 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga4Q91XY4 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga4Q91XY4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga4Q91XY4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga4Q91XY4 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhga4Q91XY4 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhga4Q91XY4 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms