Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Usp3Q91W36 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Usp3Q91W36 Gm13255-201ENSMUST00000117255 547 ntBASIC12.88□□□□□ -0.35
Usp3Q91W36 Gm14832-201ENSMUST00000121289 322 ntBASIC12.88□□□□□ -0.35
Usp3Q91W36 Gm15547-201ENSMUST00000122152 333 ntBASIC12.88□□□□□ -0.35
Usp3Q91W36 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 Gm25668-201ENSMUST00000157700 129 ntBASIC12.88□□□□□ -0.35
Usp3Q91W36 Gm17376-201ENSMUST00000166016 84 ntBASIC12.88□□□□□ -0.35
Usp3Q91W36 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC12.88□□□□□ -0.35
Usp3Q91W36 Gm28882-201ENSMUST00000185504 314 ntBASIC12.88□□□□□ -0.35
Usp3Q91W36 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.88□□□□□ -0.35
Usp3Q91W36 Gm45151-201ENSMUST00000205445 712 ntTSL 2 BASIC12.88□□□□□ -0.35
Usp3Q91W36 Gm44554-201ENSMUST00000208738 147 ntBASIC12.88□□□□□ -0.35
Usp3Q91W36 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Usp3Q91W36 CT025525.2-201ENSMUST00000227743 423 ntBASIC12.88□□□□□ -0.35
Usp3Q91W36 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Usp3Q91W36 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.88□□□□□ -0.35
Usp3Q91W36 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp3Q91W36 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Usp3Q91W36 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Usp3Q91W36 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Usp3Q91W36 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Usp3Q91W36 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Usp3Q91W36 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.87□□□□□ -0.35
Usp3Q91W36 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.87□□□□□ -0.35
Usp3Q91W36 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Usp3Q91W36 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Usp3Q91W36 Gm42937-201ENSMUST00000197360 752 ntBASIC12.87□□□□□ -0.35
Usp3Q91W36 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Usp3Q91W36 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Usp3Q91W36 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Usp3Q91W36 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Usp3Q91W36 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.87□□□□□ -0.35
Usp3Q91W36 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp3Q91W36 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.87□□□□□ -0.35
Usp3Q91W36 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Usp3Q91W36 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp3Q91W36 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp3Q91W36 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp3Q91W36 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp3Q91W36 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp3Q91W36 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp3Q91W36 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp3Q91W36 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp3Q91W36 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Usp3Q91W36 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp3Q91W36 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.86□□□□□ -0.35
Usp3Q91W36 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.86□□□□□ -0.35
Usp3Q91W36 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp3Q91W36 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp3Q91W36 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.86□□□□□ -0.35
Usp3Q91W36 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp3Q91W36 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Usp3Q91W36 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.86□□□□□ -0.35
Usp3Q91W36 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.86□□□□□ -0.35
Usp3Q91W36 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.86□□□□□ -0.35
Usp3Q91W36 Gm26083-201ENSMUST00000157904 193 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms