Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Gm25732-201ENSMUST00000175168 60 ntBASIC13.29□□□□□ -0.28
TraipQ8VIG6 Gm7003-201ENSMUST00000195089 312 ntBASIC13.29□□□□□ -0.28
TraipQ8VIG6 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.29□□□□□ -0.28
TraipQ8VIG6 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.29□□□□□ -0.28
TraipQ8VIG6 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TraipQ8VIG6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.28□□□□□ -0.28
TraipQ8VIG6 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm29615-201ENSMUST00000185371 697 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm28224-201ENSMUST00000186078 697 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm29001-201ENSMUST00000186177 697 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm28292-201ENSMUST00000186593 697 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm28101-201ENSMUST00000187608 697 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm29076-201ENSMUST00000187689 697 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm28302-201ENSMUST00000187931 697 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm28646-201ENSMUST00000188220 697 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm28205-201ENSMUST00000189177 697 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm29032-201ENSMUST00000189797 697 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm28695-201ENSMUST00000190300 697 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm37448-201ENSMUST00000192795 697 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Nsd1-205ENSMUST00000224693 852 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TraipQ8VIG6 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms