Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh18Q8VHR0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh18Q8VHR0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh18Q8VHR0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh18Q8VHR0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh18Q8VHR0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.02□□□□□ -0.48
Pcdh18Q8VHR0 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh18Q8VHR0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh18Q8VHR0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh18Q8VHR0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh18Q8VHR0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Pcdh18Q8VHR0 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh18Q8VHR0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh18Q8VHR0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Gm15823-201ENSMUST00000064305 670 ntBASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh18Q8VHR0 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh18Q8VHR0 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms