Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Gm24231-201ENSMUST00000104315 133 ntBASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Gm24255-201ENSMUST00000104481 128 ntBASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Gm31256-201ENSMUST00000194705 506 ntBASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Gm39404-201ENSMUST00000216350 313 ntBASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Gm12314-201ENSMUST00000118104 538 ntBASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Gm14726-201ENSMUST00000120623 896 ntBASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Rprd1aQ8VDS4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rprd1aQ8VDS4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rprd1aQ8VDS4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rprd1aQ8VDS4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rprd1aQ8VDS4 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rprd1aQ8VDS4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rprd1aQ8VDS4 Gm13570-201ENSMUST00000140763 309 ntBASIC12.8□□□□□ -0.36
Rprd1aQ8VDS4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rprd1aQ8VDS4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rprd1aQ8VDS4 Gm20482-202ENSMUST00000174729 825 ntBASIC12.8□□□□□ -0.36
Rprd1aQ8VDS4 Gm27320-201ENSMUST00000184892 109 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms