Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Gm27516-201ENSMUST00000184237 98 ntBASIC13.61□□□□□ -0.23
Rpap2Q8VC34 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.61□□□□□ -0.23
Rpap2Q8VC34 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.61□□□□□ -0.23
Rpap2Q8VC34 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Gm24830-201ENSMUST00000102024 166 ntBASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Gm14832-201ENSMUST00000121289 322 ntBASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Gm6621-201ENSMUST00000193251 772 ntBASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Gm26232-201ENSMUST00000083360 166 ntBASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms