Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln1Q8R317 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Gm22018-201ENSMUST00000104357 131 ntBASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Gm19309-201ENSMUST00000218295 205 ntBASIC11.79□□□□□ -0.52
Ubqln1Q8R317 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Olfr582-201ENSMUST00000098212 960 ntBASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln1Q8R317 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ubqln1Q8R317 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubqln1Q8R317 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ubqln1Q8R317 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ubqln1Q8R317 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubqln1Q8R317 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ubqln1Q8R317 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms