Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 H2-Q3-201ENSMUST00000172583 608 ntBASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Gm1821-202ENSMUST00000227415 750 ntBASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Gm26448-201ENSMUST00000082446 203 ntBASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Gm10051-201ENSMUST00000145209 414 ntBASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 AC141438.2-201ENSMUST00000215068 271 ntBASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 AC135114.1-201ENSMUST00000228682 270 ntBASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Gm9826-201ENSMUST00000029124 1299 ntBASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp7Q8R1T1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp7Q8R1T1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp7Q8R1T1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp7Q8R1T1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Gm4482-201ENSMUST00000200876 742 ntBASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Gm5051-201ENSMUST00000204085 485 ntBASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 AC125486.1-201ENSMUST00000218701 320 ntBASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Gm807-202ENSMUST00000224929 408 ntBASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms