Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Gm22121-201ENSMUST00000175148 54 ntBASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Gm44872-201ENSMUST00000207864 420 ntBASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nudcd3Q8R1N4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nudcd3Q8R1N4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Gm24231-201ENSMUST00000104315 133 ntBASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Gm12928-201ENSMUST00000117115 573 ntBASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Gm13123-201ENSMUST00000122173 492 ntBASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Gm17208-201ENSMUST00000168388 535 ntBASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Gm44855-201ENSMUST00000205725 362 ntBASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Gm20949-201ENSMUST00000206478 952 ntBASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nudcd3Q8R1N4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Gm12384-201ENSMUST00000119228 919 ntBASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.38□□□□□ -0.43
Nudcd3Q8R1N4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms