Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Gm42941-201ENSMUST00000200347 1321 ntBASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Gm23119-201ENSMUST00000158610 140 ntBASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Gm37458-201ENSMUST00000194055 410 ntBASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Gm45500-201ENSMUST00000211676 803 ntBASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx54Q8K4L0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Gm11422-201ENSMUST00000118925 1103 ntBASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Gm5705-201ENSMUST00000066241 711 ntBASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx54Q8K4L0 Gm19680-201ENSMUST00000095050 1513 ntBASIC16.14■□□□□ 0.18
Ddx54Q8K4L0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Gm29499-201ENSMUST00000189151 486 ntBASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Gm28329-201ENSMUST00000191208 689 ntBASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Gm29171-201ENSMUST00000191397 486 ntBASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx54Q8K4L0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx54Q8K4L0 Gm18367-201ENSMUST00000176139 600 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms