Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm7399-201ENSMUST00000032395 858 ntBASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Gm22058-201ENSMUST00000083393 310 ntBASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rfwd3Q8CIK8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Gm10434-201ENSMUST00000101158 471 ntBASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Olfr284-202ENSMUST00000206647 966 ntBASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Gm45925-201ENSMUST00000218882 744 ntBASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Gm7046-201ENSMUST00000221351 977 ntBASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rfwd3Q8CIK8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Gm27501-201ENSMUST00000183599 107 ntBASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Gm29396-201ENSMUST00000185659 716 ntBASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Gm44405-201ENSMUST00000198952 126 ntBASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms