Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox30Q8CGW4 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Gm14928-201ENSMUST00000120198 477 ntBASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Gm45925-201ENSMUST00000218882 744 ntBASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.53□□□□□ -0.24
Sox30Q8CGW4 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.53□□□□□ -0.24
Sox30Q8CGW4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox30Q8CGW4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox30Q8CGW4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox30Q8CGW4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox30Q8CGW4 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox30Q8CGW4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox30Q8CGW4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox30Q8CGW4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox30Q8CGW4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox30Q8CGW4 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox30Q8CGW4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Gm9002-201ENSMUST00000178437 499 ntBASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Auts2-212ENSMUST00000178555 309 ntBASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Gm44405-201ENSMUST00000198952 126 ntBASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Gm10076-201ENSMUST00000073238 384 ntBASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox30Q8CGW4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox30Q8CGW4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms