Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.07□□□□□ -0.64
ShfQ8CG80 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.07□□□□□ -0.64
ShfQ8CG80 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
ShfQ8CG80 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
ShfQ8CG80 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
ShfQ8CG80 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
ShfQ8CG80 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
ShfQ8CG80 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
ShfQ8CG80 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ShfQ8CG80 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Gm27847-201ENSMUST00000183711 107 ntBASIC11.06□□□□□ -0.64
ShfQ8CG80 Gm27375-201ENSMUST00000183799 107 ntBASIC11.06□□□□□ -0.64
ShfQ8CG80 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.06□□□□□ -0.64
ShfQ8CG80 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.06□□□□□ -0.64
ShfQ8CG80 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
ShfQ8CG80 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ShfQ8CG80 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
ShfQ8CG80 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
ShfQ8CG80 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
ShfQ8CG80 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.05□□□□□ -0.64
ShfQ8CG80 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 Gm7561-201ENSMUST00000211203 886 ntBASIC11.05□□□□□ -0.64
ShfQ8CG80 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ShfQ8CG80 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms