Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Gm13736-201ENSMUST00000119272 253 ntBASIC15.32■□□□□ 0.04
Smc5Q8CG46 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Smc5Q8CG46 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Gm22058-201ENSMUST00000083393 310 ntBASIC15.32■□□□□ 0.04
Smc5Q8CG46 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Gm2238-201ENSMUST00000192074 3669 ntBASIC15.32■□□□□ 0.04
Smc5Q8CG46 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Gm43984-201ENSMUST00000204572 2864 ntBASIC15.31■□□□□ 0.04
Smc5Q8CG46 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Gm37513-201ENSMUST00000194830 2268 ntBASIC15.31■□□□□ 0.04
Smc5Q8CG46 Gm38378-201ENSMUST00000195153 2268 ntBASIC15.31■□□□□ 0.04
Smc5Q8CG46 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Gm15806-201ENSMUST00000120696 955 ntBASIC15.31■□□□□ 0.04
Smc5Q8CG46 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Gm5035-201ENSMUST00000215581 927 ntBASIC15.31■□□□□ 0.04
Smc5Q8CG46 Gm39404-201ENSMUST00000216350 313 ntBASIC15.31■□□□□ 0.04
Smc5Q8CG46 Gm10268-201ENSMUST00000085340 555 ntBASIC15.31■□□□□ 0.04
Smc5Q8CG46 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.31■□□□□ 0.04
Smc5Q8CG46 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.31■□□□□ 0.04
Smc5Q8CG46 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc5Q8CG46 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Gm6007-201ENSMUST00000208170 823 ntBASIC15.3■□□□□ 0.04
Smc5Q8CG46 Gm45776-201ENSMUST00000212366 1522 ntBASIC15.3■□□□□ 0.04
Smc5Q8CG46 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc5Q8CG46 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Gm45428-201ENSMUST00000209619 1789 ntBASIC15.29■□□□□ 0.04
Smc5Q8CG46 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc5Q8CG46 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.29■□□□□ 0.04
Smc5Q8CG46 Gm11591-201ENSMUST00000120063 702 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms