Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.3□□□□□ -0.6
Smco1Q8CEZ1 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.3□□□□□ -0.6
Smco1Q8CEZ1 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smco1Q8CEZ1 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco1Q8CEZ1 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Mir449b-201ENSMUST00000104833 80 ntBASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Gm11779-201ENSMUST00000118541 368 ntBASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Gm38223-201ENSMUST00000194484 695 ntBASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco1Q8CEZ1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smco1Q8CEZ1 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco1Q8CEZ1 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.27□□□□□ -0.61
Smco1Q8CEZ1 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.27□□□□□ -0.61
Smco1Q8CEZ1 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco1Q8CEZ1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco1Q8CEZ1 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smco1Q8CEZ1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms