Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Itm2b-204ENSMUST00000228637 783 ntBASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Gm5687-201ENSMUST00000118252 640 ntBASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Gm12291-201ENSMUST00000121627 311 ntBASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Gm29649-201ENSMUST00000185649 419 ntBASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lrif1Q8CDD9 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lrif1Q8CDD9 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lrif1Q8CDD9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lrif1Q8CDD9 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.27□□□□□ -0.44
Lrif1Q8CDD9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lrif1Q8CDD9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lrif1Q8CDD9 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.27□□□□□ -0.44
Lrif1Q8CDD9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lrif1Q8CDD9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lrif1Q8CDD9 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lrif1Q8CDD9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms