Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Gm12015-201ENSMUST00000117065 843 ntBASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Gm12997-201ENSMUST00000120207 640 ntBASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Gm13665-201ENSMUST00000120830 528 ntBASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Gm25700-201ENSMUST00000177693 110 ntBASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Gm44651-201ENSMUST00000207343 372 ntBASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Gzmn-202ENSMUST00000225535 989 ntBASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf31Q8CCF0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Gm14130-201ENSMUST00000118417 987 ntBASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Gm26361-201ENSMUST00000158868 186 ntBASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf31Q8CCF0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prpf31Q8CCF0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prpf31Q8CCF0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prpf31Q8CCF0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prpf31Q8CCF0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.58□□□□□ -0.23
Prpf31Q8CCF0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms