Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Vps53Q8CCB4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps53Q8CCB4 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Vps53Q8CCB4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Vps53Q8CCB4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps53Q8CCB4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps53Q8CCB4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps53Q8CCB4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps53Q8CCB4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps53Q8CCB4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Vps53Q8CCB4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.48□□□□□ -0.09
Vps53Q8CCB4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Vps53Q8CCB4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps53Q8CCB4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vps53Q8CCB4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Gm14921-201ENSMUST00000118643 908 ntBASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Gm14726-201ENSMUST00000120623 896 ntBASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Gm17208-201ENSMUST00000168388 535 ntBASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Rps4l-202ENSMUST00000204242 789 ntBASIC14.47□□□□□ -0.09
Vps53Q8CCB4 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps53Q8CCB4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Cog3-203ENSMUST00000227473 4197 ntBASIC14.46□□□□□ -0.09
Vps53Q8CCB4 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Gm16505-201ENSMUST00000179981 232 ntBASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Gm43138-201ENSMUST00000199123 708 ntBASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Mir339-201ENSMUST00000083659 96 ntBASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps53Q8CCB4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.46□□□□□ -0.1
Vps53Q8CCB4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vps53Q8CCB4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps53Q8CCB4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms