Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Gm44364-201ENSMUST00000198368 141 ntBASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Gm8712-201ENSMUST00000221090 701 ntBASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Ccdc60Q8C4J0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Gm13142-201ENSMUST00000117213 1453 ntBASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Gm14726-201ENSMUST00000120623 896 ntBASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.81■□□□□ 0.12
Ccdc60Q8C4J0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Gm24255-201ENSMUST00000104481 128 ntBASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Gm7584-201ENSMUST00000175829 940 ntBASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Gm31256-201ENSMUST00000194705 506 ntBASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Gm7783-201ENSMUST00000204795 781 ntBASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc60Q8C4J0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc60Q8C4J0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc60Q8C4J0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc60Q8C4J0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms