Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Gm12390-201ENSMUST00000117897 397 ntBASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Gm6447-201ENSMUST00000118905 835 ntBASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Gm24196-201ENSMUST00000179161 110 ntBASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Gm16372-201ENSMUST00000073088 450 ntBASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Gm6091-201ENSMUST00000098307 165 ntBASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gm8213-201ENSMUST00000118191 441 ntBASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gm18062-201ENSMUST00000208020 547 ntBASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gm18055-201ENSMUST00000208254 547 ntBASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gm8598-201ENSMUST00000221184 836 ntBASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.12□□□□□ -0.63
Rft1Q8C3B8 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rft1Q8C3B8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms