Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tsen54Q8C2A2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Tsen54Q8C2A2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tsen54Q8C2A2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tsen54Q8C2A2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Tsen54Q8C2A2 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Gm26464-201ENSMUST00000157094 305 ntBASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Gm23984-201ENSMUST00000157139 203 ntBASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Mir7654-201ENSMUST00000185082 70 ntBASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Gm6180-201ENSMUST00000065243 498 ntBASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tsen54Q8C2A2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Gm6745-201ENSMUST00000199216 526 ntBASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Gm9794-201ENSMUST00000202370 423 ntBASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms