Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Gm11814-201ENSMUST00000119515 929 ntBASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Mir1982-201ENSMUST00000157368 74 ntBASIC11.64□□□□□ -0.55
Vps9d1Q8C190 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps9d1Q8C190 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Gm14921-201ENSMUST00000118643 908 ntBASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.63□□□□□ -0.55
Vps9d1Q8C190 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Gm9899-201ENSMUST00000065519 555 ntBASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps9d1Q8C190 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Gm13123-201ENSMUST00000122173 492 ntBASIC11.62□□□□□ -0.55
Vps9d1Q8C190 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms