Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Gm9823-201ENSMUST00000051212 327 ntBASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.8□□□□□ -0.36
Trub1Q8C0D0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Gm11793-201ENSMUST00000120433 981 ntBASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Gm13570-201ENSMUST00000140763 309 ntBASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Mospd4-201ENSMUST00000180618 576 ntBASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Gm2546-201ENSMUST00000182630 991 ntBASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Gm43118-201ENSMUST00000199149 775 ntBASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Gm18054-201ENSMUST00000207539 555 ntBASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trub1Q8C0D0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.79□□□□□ -0.36
Trub1Q8C0D0 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.78□□□□□ -0.36
Trub1Q8C0D0 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms