Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm15626-201ENSMUST00000117478 868 ntBASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm37782-201ENSMUST00000194879 678 ntBASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm45094-201ENSMUST00000207013 617 ntBASIC9.66□□□□□ -0.86
Chd9Q8BYH8 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm10288-201ENSMUST00000084614 537 ntBASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm42432-201ENSMUST00000197902 1617 ntBASIC9.66□□□□□ -0.86
Chd9Q8BYH8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm25766-201ENSMUST00000104101 131 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm12906-201ENSMUST00000154610 441 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm23400-201ENSMUST00000174994 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm26463-201ENSMUST00000175065 101 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm24332-201ENSMUST00000175102 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm25959-201ENSMUST00000175112 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm22475-201ENSMUST00000175169 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm22903-201ENSMUST00000175193 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm25070-201ENSMUST00000175237 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm24159-201ENSMUST00000175264 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm25299-201ENSMUST00000175283 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm23798-201ENSMUST00000175560 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm23802-201ENSMUST00000175565 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm25708-201ENSMUST00000177687 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm24370-201ENSMUST00000178007 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm23049-201ENSMUST00000178068 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm28019-201ENSMUST00000178138 101 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm25571-201ENSMUST00000178322 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm25355-201ENSMUST00000178456 101 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm24975-201ENSMUST00000178492 101 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm23189-201ENSMUST00000178954 102 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm25100-201ENSMUST00000179750 101 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm23064-201ENSMUST00000179866 101 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Mir7088-201ENSMUST00000184227 86 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm43962-201ENSMUST00000203898 190 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm45410-201ENSMUST00000211331 1093 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm45758-201ENSMUST00000212448 1006 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm26616-202ENSMUST00000195676 3107 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm12626-201ENSMUST00000117339 1983 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm22763-201ENSMUST00000158374 107 ntBASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd9Q8BYH8 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms