Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Gm23931-201ENSMUST00000103842 109 ntBASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Gm13392-201ENSMUST00000117708 150 ntBASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Gm11637-201ENSMUST00000120601 592 ntBASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Gm17208-201ENSMUST00000168388 535 ntBASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC13.18□□□□□ -0.3
Trerf1Q8BXJ2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Gm17420-201ENSMUST00000164753 153 ntBASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trerf1Q8BXJ2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Gm5187-201ENSMUST00000117317 991 ntBASIC13.16□□□□□ -0.3
Trerf1Q8BXJ2 Gm12363-201ENSMUST00000122250 668 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms