Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp54Q8BL06 Gm12990-201ENSMUST00000120372 468 ntBASIC17.33■□□□□ 0.37
Usp54Q8BL06 Gm12628-201ENSMUST00000122193 382 ntBASIC17.33■□□□□ 0.37
Usp54Q8BL06 Gm8459-201ENSMUST00000162504 760 ntBASIC17.33■□□□□ 0.37
Usp54Q8BL06 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Usp54Q8BL06 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp54Q8BL06 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
Usp54Q8BL06 Gm28323-201ENSMUST00000186817 2499 ntBASIC17.33■□□□□ 0.37
Usp54Q8BL06 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp54Q8BL06 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Usp54Q8BL06 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp54Q8BL06 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp54Q8BL06 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp54Q8BL06 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp54Q8BL06 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp54Q8BL06 AC166836.1-201ENSMUST00000219933 1795 ntBASIC17.33■□□□□ 0.36
Usp54Q8BL06 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp54Q8BL06 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp54Q8BL06 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Usp54Q8BL06 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp54Q8BL06 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm26013-201ENSMUST00000104404 119 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm12030-201ENSMUST00000121917 223 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm7150-201ENSMUST00000122032 981 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm28937-201ENSMUST00000185413 695 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm29400-201ENSMUST00000187208 695 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm28662-201ENSMUST00000188446 695 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm28251-201ENSMUST00000188835 695 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm37318-201ENSMUST00000194325 695 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm38017-201ENSMUST00000194768 695 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm37287-201ENSMUST00000195449 695 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm37793-201ENSMUST00000195548 695 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp54Q8BL06 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp54Q8BL06 AC154257.1-202ENSMUST00000224729 843 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm15610-201ENSMUST00000120584 195 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 AC124457.1-201ENSMUST00000198845 120 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Gm9139-201ENSMUST00000218817 700 ntBASIC17.32■□□□□ 0.36
Usp54Q8BL06 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp54Q8BL06 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp54Q8BL06 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp54Q8BL06 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC17.31■□□□□ 0.36
Usp54Q8BL06 Gm11783-201ENSMUST00000119549 885 ntBASIC17.31■□□□□ 0.36
Usp54Q8BL06 Gm14942-201ENSMUST00000119642 336 ntBASIC17.31■□□□□ 0.36
Usp54Q8BL06 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Gm44315-201ENSMUST00000203041 219 ntBASIC17.31■□□□□ 0.36
Usp54Q8BL06 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Usp54Q8BL06 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp54Q8BL06 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp54Q8BL06 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms