Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh20Q8BIZ0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh20Q8BIZ0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh20Q8BIZ0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh20Q8BIZ0 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.14□□□□□ -0.47
Pcdh20Q8BIZ0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh20Q8BIZ0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh20Q8BIZ0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh20Q8BIZ0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Gm23931-201ENSMUST00000103842 109 ntBASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Gm16379-201ENSMUST00000161469 348 ntBASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Gm8762-201ENSMUST00000193486 339 ntBASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Gm42693-201ENSMUST00000196779 631 ntBASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Gm19184-201ENSMUST00000196798 928 ntBASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Gm4768-201ENSMUST00000206199 686 ntBASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh20Q8BIZ0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Gm25927-201ENSMUST00000175058 117 ntBASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Gm27572-201ENSMUST00000183702 255 ntBASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Gm19163-201ENSMUST00000223313 780 ntBASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Snora73a-201ENSMUST00000082453 205 ntBASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh20Q8BIZ0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms