Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc40Q8BI79 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Gm4984-201ENSMUST00000115987 360 ntBASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Gm7063-201ENSMUST00000186840 981 ntBASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc40Q8BI79 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc40Q8BI79 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc40Q8BI79 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc40Q8BI79 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc40Q8BI79 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Ccdc40Q8BI79 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc40Q8BI79 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc40Q8BI79 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.02□□□□□ -0.32
Ccdc40Q8BI79 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc40Q8BI79 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc40Q8BI79 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc40Q8BI79 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Snord83b-201ENSMUST00000104546 94 ntBASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Gm29127-201ENSMUST00000188304 517 ntBASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc40Q8BI79 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc40Q8BI79 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc40Q8BI79 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms