Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim6Q8BGE7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Gm23363-201ENSMUST00000175024 79 ntBASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Gm38671-201ENSMUST00000200573 130 ntBASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim6Q8BGE7 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms