Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
Vrk1Q80X41 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Vrk1Q80X41 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Vrk1Q80X41 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Vrk1Q80X41 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.89□□□□□ -0.51
Vrk1Q80X41 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Gm45598-202ENSMUST00000210719 986 ntBASIC11.89□□□□□ -0.51
Vrk1Q80X41 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.89□□□□□ -0.51
Vrk1Q80X41 Gm18730-201ENSMUST00000218038 343 ntBASIC11.89□□□□□ -0.51
Vrk1Q80X41 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.89□□□□□ -0.51
Vrk1Q80X41 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.88□□□□□ -0.51
Vrk1Q80X41 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Gm27552-201ENSMUST00000183351 62 ntBASIC11.88□□□□□ -0.51
Vrk1Q80X41 Gm27844-201ENSMUST00000183613 62 ntBASIC11.88□□□□□ -0.51
Vrk1Q80X41 Gm19187-201ENSMUST00000206781 892 ntBASIC11.88□□□□□ -0.51
Vrk1Q80X41 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vrk1Q80X41 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms